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(1)

静岡大学教育学部研究報告 (自然科学篇

)第

46号 (1996.3)31‑48

Redox Properties of Electron Carrier Proteins

of Low Redox Potentials

Tatsuhiko Yecr

(Received for publication, October lt, lggs)

Abstract

This paper presents as many descriptions as possible on redox properties, ie, standard redox potentials, millimolar absorbances, and EPR-g values of various low-potential electron carrier proteins isolated from various sources. Some carrier proteins of high redox potentials and non-protein carriers are included for comparison.

1

. Introduction

Electron carrier proteins are playing important roles in the energy metabolism of various kinds of life forms, and some of them have been attracting attentions of a number of researchers. Each of these spot-lighted carrier proteins has been a subject

of more than ten papers. On the other hand, majority of carrier proteins appear

irregularly in various kinds of journals. This paper presents as many descriptions as possible on redox properties, ie, standard redox potentials, millimolar absorbances,

and EPR-€' values of various low-potential electron carrier proteins isolated from various sources. Some carrier proteins of high redox potentials and non-protein carri- ers are included for comparison, but these are fragmentary.

2. Tables

E is used instead of Eo (standard redox potential in mV). e is used instead of I .nr

(millimolar absorbance coefficient), and it refers to the value for the monomer in case

of proteins, unless otherwise specified; e552 means r .ru 8t bb2 nm, and for the oxidiz- ed form of the carrier unless indicated as r for the reduced form or as sq for the semiquinone form. A e is oxidized-minus-reduced millimolar absorbance difference at the wavelength specified. g is EPR 5'-value for the oxidized carrier unless otherwise specified. 91, 92, etc correspond to the g-values which have the redox potentials of El,

F,2, etc, respectively. The number of amino acid residues (AA) per monomer is given

with the PIR accession numbers (in brackets) when available. References are cited by the name of the first author and the year of publication. The names of other authors are omitted. The abbreviations appearing in the tables are explained in the table, or self-explanatory.

2.1. Efecton Carrier Proteins 2.1.1. Monoheme cytochrome

Cytochrome c (C), cz (CZ>, c-550 (Cbb0), c-b53 (Cbb3), etc

C (horse) Heme,,/L04AA [A0000s]

E:255 [Guo 1991]

E:210 [Guo 1991]

E:270 (pH 8.0) [Armstrong 1991J

(2)

Tatsuhiko Yagi

C,isoform‐ 1(Sα

ccん

α rO

ycθs caraυjsjα

a)Heme1/108AA[S22785]

E=260[Louie 1990]

Cl(Rん οαο

bαcι

ο r caps 滋ι s)Heme1/116AA[A25452]

E=358[Benning 1991]

Cl(Rん

ospjri″

じ脇 rabr 脇 )Heme1/112AA[S08213]

E=323[Salemme 1973]

C550(ゴ И jcrOの

sι,s 

α arば η

OSα

)Heme1/130AA

E=‐ 260[Cohn 1989]

C550(Parα θ ο

cc

Sル 滅ι

rttcα

ttS)Heme1/135AA E=250[Timko宙 ch 1974]

C551(Psc αο

ttο

πα s  αθ

rLttjんosα

)Heme1/′ 82AA E=260[Haladiian 1983]

E=260[Hi11 1987]

C553(Des

JJo脇iCrObj 脇 bαc Jαι れ

,9974,or DSM 1743)Heme1/mOl

E>‐ 50[Moura 1987]

C553(Dθ

s J」

o脇

jCrο bjじ脇 bαc Jαι 脇

Norway 4)Heme1/80AA E=50[Fauque 1979]

E=40[Bianco 1983]

C553(Das

J/ojjbriO dυs J/aricα

tts NCIMB 8372)Heme1/mOl E=0[Eng,Neuiahr 1989]

C553(Das

J/oυjbrjο

 dbs

J/aricα

tts NCIMB 8387,Berre‐ Eau)Heme1/mol

E>‐ 50[Moura 1987]

C553(Dθ

s JJoυjbrjο

  υ じ Jgatts Hildenborough)Heme1/79AA[A44752]

E=20[Bertrand 1982]

E=20[Bianco 1982]

E=20[Koller 1987]

E=62(pH 7.0,25° )[Verhagen 1994a]

gl=3.154,2.065[Bertrand 1982]

C553(Des

J」Oυ jb´

jO υ

Jgα

ris Miyazaki)Heme1/79AA ECCDV5M]

E=26[Yagi 1994]

e695==0。8, e526==10。

1. e410==110, e360==28。

1, e280==19。

3, e553r==24.7, e524r==16.1,

e418r=154,e317r=33.1,Δ  e552=‐

18。

0[Yagi 1994]

C553(Pθ

Jο

dc″ ο

tt J

ι θο J閉 )13.O kD E=220[Steinmetz Fischer 1982]

C555(Cん

Jοrοbj 脇 ιんjοs Jraιopん

jJ閉 )Heme1/′ 86AA[A00116]

E=145[Korszun 1977)

C555(Cん

JOrobjじ υjbrjo」

orma)Heme1/11。 O kD E=80[Steinmetz 1983]

C555(Pθ JOdc″ οん

J

ι οο

J

m) E=160[Steinmetz 1982]

2.1.2. Polyhome cytochromo

El, E2, etc express the  Π lidpoint potentials of individual hemes(nlicroscopic potentials), and El, E2, etc fo1lowing superscriptm express the formal macroscopic potentials of polyheHlic cytochromes.

Cytochrome c3(C3)

C3(Des

J」obじJb

S CJongaι s)Heme4/′

13。

7kD

El=‐ 30,E2,E3,E4(av)=‐ 165[Samain 1986]

e531=35。 6,e408=417,e280=31。 4,e551r=116.5,e522r=61。 4,e418r=718[Samain

1986]

C3(Des

J/o脇jCrο bj 脇 bαc 施ι れ

,9974;or DSM 1743)Heme4/mOl

El=¨ 70,E2=¨ 280,E3=¨ 300,E4=‐ 355[Moura 1988]

El=‐ 140,E2=… 200,E3=‐ 320,E4=‐ 360[Moren0 1991]

mEl=‐ 120,E2=‐ 286,E3=‐ 296,E4=¨ 335[Coutinh0 1994]

(3)

Redox Properties of Electron Carrier Proteins of Low Redox Potentials

33

g1:2.99, 2.26, 1.51; g2:3.41; g3-3.05, 2.21, L.M; g4:3.18 [Moura 1988]

C3 (Desulfomicrobiurn baculatunz Norway 4) Hemet,/ll8AA ICCDVBN]

E1: -I25, E2:-L25, E3:-305, E4:-325 lCammack 19841

E1:-150, E2=-270, E3: -3%, E4:-355 [Gayda 1985J

E1:-150, -275>82)-300, -325>E3)-330, -350>81)-SSS [Gayda 1983]

El:-150, E2:-300, E3:-330, M:-355 [Guigliarelli 1990]

'El:-165, E2:-305, E3:-365, E4:-400 [Bianco 1981a]

-El: -L72, E2:-307, E3: -362, E4:-397 [Bianco 1981a]

g1:2.94, 92:3.06, 93:3.01, g4:3.36 [Cammack 19S4]

g1-2.92; 92:3.37; g3:2.99; g4:3.L2 [Guigliarelli 1990]

g1:2.936, 2.266, 1.510; g2:3.366, 1.985, 0.896); g3:3.006, 2.257,1.391;

g4:3.123, 2.L99, 1.358 [More 1990)

e408: 570, e552r:130 A e552: -91 [Capeillene-Blandin 1986]

C3 (Desulfouibrio desulfuricans Berre S) Heme n,/mol E1: -225, E2:-305, E3:-335, E4:-375 [Bruschi 1984]

C3 (Desulfouibrio desulfuricans El Agheila Z) Hemen,/mol

E1: -235, E2:-265, E3: -290, M:-320 [Bruschi 1984]

C3 (Desulfouibrio desulfuricans NCIMB 8372) Hemet,/mol

El: -%17, E2:-336, E3:-336, E4:-337 [Wang 1991J E1: -250, E2:-313, E3:-333, E4:-398 [Wang 1991J EI-: -255, E2:-323, E3: -325, E4:-395 [Wang 1991J

El: -252, E2:-316, E3: -3L7, E4:-374 [Wang 1991J

El: -252, E2:-3L7, E3: -3L7, E4:-363 [Wang 1991J e553r:121 [Wang 1991J

C3 (Desulfouibrio gigas NCIB 9332) Hemeq,/lllAA ICCDVSG]

El: -235, E2:-235, E3:-306, B[:-315 [Xavier 1979]

E1:-195, E2:-295, E3:-315, M:-330 [Nivi6re 1988]

E1:-180, -225>EZ)-255, E3: -255, E4:-290 [santos 1984 or Coletta 1991]

'E1: -205, E2:-290, _2g5>Eg)-80b, E4:_Ba0 (pH 9.9) [Coletta 1gg1]

91-2.96, g2:2.83, g3:2.83, 94:2.96 [Xavier t979]

C3 (Desulfouibrio uulgaris Hildenborough) Hemer,/nl e,d, [CCDV3]

El: -2U, E2:-310, E3:-319, M:-3%l lDerVartanian 19?8]

E1: -226, E2:-34I, E3:-310, M:-377 [Niki 1984]

E1: -290, E2:-335, E3:-345, M:-375 [Bruschi 1984]

El:-300, E2:-320, E3:-350, B[:-365 [Teixeira 1993]

'E1: -263, E2:-32L, E3: -329, E4:-381 [Niki 1934]

'81: -250, E2:-310, E3:-310, E4:-330 [Dolla 1994]

e408: ffi1 , e552r:159, A e552: -116 [Capeille,re-Blandin 1986]

e552r:115 [Dolla 1994]

C3 (Desulfouibrio uulgaris Miyazaki) Hemet,/

107

AA ICCDVBM]

E1,E2,E3,Bt(av) : -290 [Yagi 19?1]

El: -243, E2:-316, E3: -299, M:-351 [Niki 1984]

E1: -230, E2:-300, E3:-310, E4:-360 [Gayda 19871

-220>El)-250, -320>EZ)-325, -330>Eg)-335, -355>M)-g0O lBenosman 1989]

El: -270, E2:-325, E3:-305, M:-3bb (30", p'H 2.1) [Fan 1gg0a]

'E1: -225, E2:-278, E3: =298, M:-339 [Sokol 1980]

-El: -2/10, E2:-297, E3:-315, B[:-357 (pH 7.1) [Niki 1984]

'El: -299, E2:-293, E3:-310, E4:-3S2 (p'H ?.1) [Kimura 1986]

'81: -227, E2:-287, E3: -320, M:-366 [Gayda 1989J

'E1: -235, E2:-280, E3: -320, M:-370 [Benosman 1989]

'81: -260, E2:-312, E3: -327, M:-369 [Fan 1990b]

g1:2.72, t.675; 92:2.965, L.425; g3:3.38; g4:2.8L, 1.590 [Gayda 1937]

g1:2.75; 92:2.97; g3:3.29; g4a:2.81 and g4b-2.93 [Benosman 1989]

g1: 2.790, 2.297, 1.638; 92:2.982, 2.3L2, 1.433; g3:3.405, 2.002, 1.069;

(4)

34

Tatsuhiko Yagi

g4a:2.946, 2.315, 1.516 [More 1990]

e532:39.0, e4L0:4M, e350:90.8, e280:35.6, e552r:116, e524r:58.5, e4L9r:733, e325r:137, Ae552:-86.3 [Yagi 1994]

CB (Desulfouibrio uulgaris Zhilina) E1: -t20, Heme ',/mol

E2:-230, E3:-305, M:-325 [Bruschi 19S4]

CB (Thermodesulfobacteriurn contrnune) Heme r,/ tg.gkO

El:-140, E2:E3:M:-Zg0 (pH 7.6, 25" ) [Hatcnikian 1984]

e532: 48.5, e408.5:604, e351: 120, e551.5r: t30, e522.5r: 74.L, e418.5r: 975

[Hatctrikian 19&4]

CB (Mr 26000) (Desulfomicrobiurn baculaturn Norway 4) Heme n,/tttA,A dimer E1:-180, E2:-210, E3: -320, M:-390 [Gayda 19851

E1: -2L0, E2:-270, E3: -325, E4:-365 [Loutfi 1989]

e553r: ?/12,/ dimer [Bruschi 1994]

C3 (Mr 26000) (Desulfouibrio uulgaris Hildenborough) Hemet,/dimer

El: -290, E2:-335, E3: -345, E4:-375 [Loutfi 1989]

C7 (Desulfuromonas acetoridans) Hemes,/ 68AA [CCDS7]

-L70>E1,E2,F;3> -220 [Bianco 1981b]

E1: -L40, E2:-210, E3: -%10 lBruschi 19841 High molecular mass cytochrome (Hmc)

Hmc (Desulfouibrio uulgaris Hildenborough) Heme,,./514AA [439193]

16 hemes are classified into 3 groups, E:0, E:-100, E:-250 There are 1 or 2 high spin hemes (EPR). [Bruschi 1992)

E1:61(n:1, high spin), E2:E16:-200(n:0.6) (pH 7.5) [Verhagen 1994b]

Hmc (Desulfouibrio uulgaris Miyazaki) Heme ",/ AShD

El(high spin):60, E2:15, E3: E4:E5: E6: E7: -L20, E8: -I25, E9: -135, E10:

E11:-190, E12:813:-195, E14: -205, E15:816:-260 [Ogata 1993]

e529:153, e409:1820, e355:380, e280:140, e553r:400, e523r:221, e4l9r:2735, e325r:630, Ae552:-286 [Yagi 199aJ

2.1.3. Flavodoxin (Flx)

El is for Flx semiquinone,/dihydroFlx, and E2 is f.or Flx,/Flx semiquinone.

Flx (Anabaena uariabilis) tr'Utrl ,,/LIOAA,

E1:-890, E2:_f9b (pH ?.0), El:_419, EZ:-2S5 (pH 9.0) [Fittat 1990]

Flx (Azacystis nidulani f'nnN r/tz0AA

El: -447 , E2: -22L lBntsch L9721

e580:0.1, e466:9.0, e400:4.8, e580sq:4.7, e466sq:2.6, e400sq:1.9, e580r:0, e466r:0.2 [Entsch 1972]

Flx (Azotobacter chroococcum) FMN ,,/ mol

E1:-520, E2:-115-55x (pH-7.0) [Deistung 1986J

e452:10.0, e370:9.0, e350:7.1, e506:e506sq:3.0, e358:e358sq:8.5, e580sq:5.2, e452sq:2.6, e370sq:5.2, e350sq:8.0, e417sq:e417r:1.8, e452r:1.6, e370r:5.5, e350r:5.4 [Deistung 1986]

Flx I (Azotobacter uinelandit) FMN r,/Zt.SUO

El:-eZ0 (pH 7.0, 25" ) [Klugkist 1986]

e458:11.6, e599sq:4.8, e458sq:3.0, e458r:t.2 [Klugkist 1986]

Flx II (Azotoflavin) (Azotobacter uinelandit) FMN

',/Lz9Ae, IFXAVEP]

El: -495, E2:50 (pH 8.2) [Barman L972]

E1: -4U, E2:-290 GH 7.7) [recalcd from Yoch L972a]

E1:_blb, E2:-ZS (pH 9.0, Zbo) [Watt lg7g]

El: -480, E2: -22L lHofstetter 19851 El:-500 [Klugkist 1986]

e452:11.3, e581sq: 53, 452sq: 3.0, e452r:1.5 [Klugkist 1986]

Flx III (Azotobacter uinelandit) FMN,,/Zt.Skn

E1:-S00 (pH 7.0, 25" ) [Klugkist 1986]

(5)

Redox Properties of Electron Carrier Proteins of Low Redox Potentials

35

e46L- 10.6, e592sq: 5.4, e46lsq:3.1, e461r:1.5 [Klugkist 1986]

Flx (C/o stridium beijerinchtt MP) FMN

',/tggnA, IFXCLEX]

El:-399, E2:-g2 (pH 7.0, 25o ) [Mayhew 1971]

El:-480, E2:-162 (pH 8.2) [Mayhew 1gZ1]

e575: 0.0, e445: 10.4, e376: 9.1, e272:46.8, e575sq: 4.62, eMSsq:Z.A, e376sq:4.85, e350sq: 8.4, e575r:0.0, eMSr:1.75 [Mayhew 1971]

Flx (C/ostridium pasteurianum) FMN ,,/mol

El: -4L9, E2:-fg2 (pH 7.0, 25o ) [Mayhew 1971]

El: -490, E2:-203 (pH 8.2) [Mayhew I97I]

e575:0.0, eM3:10.4, e374:8.47, e272:45.8, e575sq:4.55, e443sq: 2.08, e374sq: 4.65, e350sq: 8.4, e575r:0.0, eMBr:1.60 [Mayhew L97L]

Flx (De sulfouibrio El: -M0, E2:-150 gigas) fnaN [Dubourdieu ',/ mol 1975]

Flx (Desulfouibrio desulfuricans ATCC 27774) FMN,,/146AA E1:-387, E2:-aO (pH 6.7, 25o ) [Cataeira 1994]

E1:-af0 (pH 7-10), E2:-100-59x(pH-8.0) [Caldeira L994]

e452:10.3, e275:37.0, e580sq: 4.2 lCaldeira 19941 Flx (De sulfouibrio e456: desulfuricans Berre-Eau) FttlN ',/ mol

10.04, e374:8.46, e274: 45.U [Fauque 1987]

Flx (De sulfouibrio El:-aa0 (pH salexigenes) FMN 7-10), E2:-fo8 './ (pH mol

6.7), -196 (pH 8.0) [Caldeira 1994]

Flx (Desulfovibrio uulgaris Hildenborough) fUN

',/USA,A, IFXDV]

El: -M0, E2:-150 (pH 7.7) [Dubourdieu 1975]

El: -462, E2:-175 (pH 8.2) [Dubourdieu 1975]

El:-435, E2:-re9 (pH 7.0, pH-dependent 5.5-8.0) [curley 1gg1]

El: -M0, E2:-f43 (pH 7.0, pH-dependent 5.5-8.0) [Curley 1991]

e460: L0.7, e580sq: 4.L, e357r: 4.1 [Dubourdieu 1975]

e458: 10.7, e378:13.0, e273: 46.3, e580sq:4.75 [Curley 1991]

Flx (Escherichia coli) FMN r,/tzlA,A

El: _455, E2:_Zgb (pH Z.Z) lVetter 1g?1]

El:-410, E2:-%0 (pH 7.7) [Vetter 1g?1]

El: -440, E2:-279 (pH 8.2) lVetter 1921]

Flx (Klebsiella pneurnoniae) FMN r,/tllA.A.

El: -4lz-Lgx (pH-7.0), E2: -lb8-Gbx (pH-?.0) [Deistung 19861

e454:10.1, e370:9.6, e340:7.L, e502:e502sq:2.7, e352:e352sq:8.8, e580sq:4.1, e454sq:2.9, e370sq:5.9, e340sq:8.0, e410sq:e410r:2.4, e454r:1.3, e370r:4.3, e340r:4.9 [Deistung 1986]

Flx (Megasphaera elsdenii; Peptostreptococcus elsdenii) FMN.,/L}7AA IFXME]

E1:-gZB (pH 7-10), E2:-11b-b9x(pH-2.0) [Mayhew 1969]

2.1.4. lron-sulfur protein Ferredoxin (Fd)

Fd (Agr E:-223, obacteriurn turnefaciens) g(red)=1.96 [van lZge-ZSl Beeumen ',/ 1975] mol

Fd I (Azotobacter chroococcum) [3Fe- S]

,

[4Fe-4Sf ,,/ mol E1:-460 (alkaline), EZ:-6ab (pH 8.8) [Armstrong lgggJ e400: 29.8, e280:51.4 [Armstrong 1983]

Fd I (Azotobacter uinelandii) [gFe-as],[4Fe-4s], ,/toee,e, IFEAV]

. El:340, E2:-420, g:2.0L [sweeney 1975J

E1: -425, E2:-647 [Iismaa 1gg1]

Fd I (Bacillus polyrnyxa) [+f'e-aS] r,/g.gkO

E: -390 [Yoch L972bJ

E: -377 -11 x (pH-7.0) (n - l, 25" ) [stombaugh 19ZG]

Fd II (Bacillus polymyra)

(6)

Tatsuhiko Yagi

E=‐

422‐

24×

(pH‐

7.0)(n=1,25° )[Stombaugh 1976]

Fd(Bα

cjJJ s sι

θα

roι

ん arttopん

jJじ

s)[4Fe‐ 4S]1/81AA[FEBSFF]

E=¨ 280(pH 8。 0)[Mullinger 1975]

Fd(働

rοttα

ι

j

脇 υ

jttOs

腕 D)[4Fe‐ 4S]2/82AA[FEKRV]

E=‐ 490(n=1)(pH 7.0)[Bachofen 1966]

E=‐ 489(n=2)(pH 9。

0‐

9.5)[Ke 1974]

E=‐

482‐11× (pH‐8。

0)(n=1,25° )[Stombaugh 1976]

E=‐480(pH 8。

0,25°

)[Watt 1979]

E=‑470[Meyer 1983]

E=‐ 460(pH 8。

0,25°

)[Smith 1990]

Fd(CJο

sιrj醐

脇 α

cj醐̲

月 cj)[4Fe‐ 4S]2/55AA[FECLCU]

E=‐ 434(n=1)(pH 7.0‐

7.9,25°

)[Stombaugh 1976]

E=‐

434¨

13×

(pH‐

7.0)(25° )[Lode 1976]

Fd(α

osι

rid 脇

θ

rjα

れじ屁 )[4Fe‐ 4S]2/55AA[FECLCP]

E=‐407[Sobel 1966]

E=‐ 390(n=1)(pH 6.1‐ 7.4)[Tagawa 1968]

El=‐ 367(n=1),E2=‐ 398(n=1)(pH 7.4)[EiSenstein 1969]

E=¨ 390(n=2)(pH 8。 8)[Ke 1974]

E=‐

403‐12× (pH‐

7.0)(n=1,25° )[Stombaugh 1976]

E=‐

405‐16× (pH‐

7.0)(25° )[Lode 1976]

E=‐

387‐11× (pH‐

7.0)(25°

,0。

38M NaCl)[Lode 1976]

E=‐ 375(pH 8.0,25° )[Watt 1979]

E=‐ 370[Meyer 1983]

E=‐ 420(pH 7.6,lM NaCl)[Bianco 1984]

E=‐ 396(pH 6。

4‑8。7,25°

)ESmith 1990]

E=‐ 351(pH 7。 4)[Armstrong 1991]

e390=30[Sobel 1966]

Fd(CJosι

rう

醐 脇 ι

arι

α

rjυOrじ

脇 )[4Fe‐ 4S]2/55AA

E=‐424(n=1)(pH 7.0,25° )[Stombaugh 1976]

Fd I(CJosι rjdじ mι ん

arttο

α

ι

jc

脇 )[4Fe‐

4S]1/′

63AA[FECLC]

El,E2(av)=‐ 350[Elliott 1982]

Fd H(CJο

rid 脇 ι ん ermο α

caιjc

れ )[4Fe¨ 4S]2/6.7kD(4Fe4S1/63AA?) El,E2(鉗 )=‐ 365,g=2.01;g(red)=2.05,1.92,1:89[Elliott 1982]

E=‐ 385(pH 8。

0,25°

)[Smith 1990]

e390=30。 4,e280=41.4 EElliott 1990]

Fd(CJosι河醐 脇 ι んarmoca″じ脇 )[4Fe‐ 4S]2/55AA[A24932]

E=‐ 430(pH 7.6,lM NaCl)[Bianco 1984]

e390=31.5[CapeilLtte¨ Blandin 1986]

Fd(α ostri醐 れ ι んθ rmosα

ccん

α ro″ ι

jc

協 )[4Fe‐ 4S]2/55AA[FECLCT]

E=‐ 381(pH 7.0),E=‐ 408(pH 8。 0)(25° )[Smith 1990]

Fd I(Dθ

s J」

0腕

iC´

ο

bj

bac

鯰ι屁 Norway 4)[4Fe‐ 4S]1/59AA[A25273]

E=‐374(pH 8.0)[Guerlesquin 1982]

E=‐ 375[Capeiltte̲Blandin 1986]

e390=17.5[Capeiltte̲Blandin 1986]

e400=17.5[Moura 1994]

Fd H(Des

J/0脇jCrObj 腕 bαc 施ι 脇

Norway 4)[4Fe¨ 4S]2/59AA[FEDV2N]

‐ 440>E>>¨ 500(pH 8。 0)[Guerlesquin 1982]

El=‐ 450,E2=‐ 500[Capeilltte‐ Blandin 1986]

E=‐ 550[Moura 1994]

e390=31.5[Capeilltte‐ Blandin 1986]

e400=31.6[Moura 1994]

Fd I(Das

J/oυjbrjο arricα屁

s Benghazi)[4Fe‐ 4S]1/61AA[FEDVlA],dimer

e380=21。 28,e30諄 =28.56,e283=37.87[Hatchikian 1979]

e400=28.5[Moura 1994]

(7)

Redox Properties of Electron Carrier Proteins of Low Redox Potentials

37

Fd II (Desutfouibrio africanus Benghazi) [afe-aS] ,,/A..SdD. dimer

e385:18.65, e308s:23.51, e290:28.95, e283:30.15 [Hatchikian 19?9]

Fd III (Desulfouibrio africanus Benghazi) [gF'e-aS]'[aFe-as],,/unA IFEDV3A], dimer

El: -L40, E2:-410 [Moura 1994]

e400:28.6 [Moura 1994]

Fd [4Fe-4S]',/A.OUO (Desulfouibrio desulfuricans, Berre S, NCIB 3388)

E: -330 lZubieta 19731

Fd I (Desulfouibrio grgas NCIB 9332) [af'e-aS] ,,/sga,A, IFEDVFG], dimer E:-330 (pH 7.6) [Bianco L9777

E: -455 [Moura 19?8b]

E:-450 [Moura 1994]

Fd II (Desulfouibrio grgas NCIB 9332) [gF'e-aS],,/sgAa, IFEDVFG], rerramer

E: -350 (pH 7.6) [Bianco L977]

E: -130 [Moura 1978b]

El:-130, E2:-690 [Moreno 1993]

E:-130 [Macedo 1994]

Fd I (Desulfouibrio uulgaris Miyazaki) [3Fe-aS],[aFe-4S],,/at/'d, [A300%], dimer E1>-300)nz (pH ?.4) [Ogata 1988]

30>81>-310 (composite of 3 different Nernst curves), E2:-440 [Asso 1995]

EI>-%5, E2:-425 [updated from Ogata 1988]

e400:31.5, e230:45.7 [updated from Ogata 19SS]

g1-2.01 (3Fe-4S), g}r:z.}M, 1.948, t.92A, 2.062 (af'e-AS) [Asso 1995]

Fd II (Desulfouibrio uulgaris Miyazaki) [afe-aS] ,,/lgA,n IFEDV2V], dimer E:-405 (pH 7.4) [Okawara 1988]

E: -414 (pH 7.4) [updated from Okawara 1988]

E:-4L7 (pH 2.4, Zl") [Asso lggb]

e400:16.1, e280:31.0 lupdated from Okawara 1988]

S(red):2.0M, 1.948, L.920; 2.062, 1.948, 1.898 [Asso 1995]

Fd (Desulfurornonas acetoridans) [aFe-aS] r,/ 6.ZUO e385: 29.8, e300*:37.3, e2.83:40.1 [Probst 1978]

Fd (Giardia duodenalis) [gfe-aS] ,,/S.lg kD

e406:13.1, e296:16.65, g-Z [Townson 1994]

F d (M ethano co ccus therrnolithotr ophicus) [4Fe-aS ] r,/

AO

AA

I

S1M76 ] E=-385, g:2.0t (rough estimate) [Uatcnikian 1989]

e390: 29, e283:36.7 [Hatchikian 1989]

Fd (parsley) E:-416 [2Fe-2S] (pH 7.9a), './mol E:-gZ8 (pH 8.14) (ZS') [Fee 1921]

Fd (Peptococcus aerogenes) [4Fe-4S] z,/S+AA IFEPE]

E: -427-8 x (pH-7.0) (n: t, %o ) [stombaugh 1976]

Fd III (Rhodobacter capsulatus) [Afe-aS] r,/L0OA,e, [A46701], dimer

81,E2,E3,M(av):-M0, 9:2.07, 1.91, 1.87; S(oxi) -L,/2 [Jouanneau 1993]

e388:58.0, e450: 4L2, e388r :39.2, e450r: L6.9,/ dimer [Jouanneau 1993]

Fd I (nhodoUacter capsulata) [aFe-aS] r,/1Se,A, [may be A33498]

E: -377(n:2) lZhu 19821

Fd (spinach, Spinacia olarecea) lZfe-ZSlt,/97AA IFESPl or FESP2, not specified]

E:-41b(n:1) (pH G.?-8.2) [Tagawa 1963]

E:_423(n:1) (pH 8.0-9.b) [Ke 19Ta]

E:-48(n:1) (pH 2.0, 25") [stombaugh 1gZ6J E:-430 (pH 8.0, 25") [Watt 1929]

e465:8.80, e420:9.68, e325:L2.78, e276:20.16, e465r:3.70, e420r:4.55 [Tagawa

1e681

putidaredoxin (Pseudornonas putida) [2Fe-2S] r,/ t}Ae,n IPXPSEP]

E:-230 [Meyer 1983]

(8)

Tatsuhiko Yagi

High口 pOtential iron‐

sulfur proto:n(HiP:P)

HiPIP(Cん

rοttα

ι

j

脇 υれ

Osじ

m)[4Fe‐ 4S]1/85AA EIHKREV]

E=350[Bartsch 1978]

E==360 [R/1eyer 1983]

e388=16.1,e283=41.3△ e480=10。 7[Bartsch 1978]

HiPIP(Cん

rοttα

ι

j

腕 ″α

rttjれ

多ち DSM 173)[4Fe¨ 4S]i/8.9 kD E=355;pI=3.8,pI(red)=3.6[Wermter 1983]

HiPIP I(Ecι οι ん

jorん

οαο

spjrα

  υα

c 01し

ι α )[4Fe‐ 4S]1/70AA[IHERl]

E=260[Meyer 1983]

HiPIP II(Ecι οι ん

Jοrん

οご

ospjrα

  υα

c 01し

ι α )[4Fe‐ 4S]1/71AA[IHER2]

E==150 [Meyer 1983]

HiPIP I(Ecι οι ん

jorん

οα

ospjrα

んα

JopんjJα

)[4Fe‐ 4S]1/70AA[IHERl]

E=120[Meyer 1983]

HiPIP II(Ecι οι ん

jοrん

οdospjrα んα

Jopんj施

)[4Fe‐ 4S]1/76AA[IHER2]

E=50[Meyer 1983]

HiPIP(Paracoccas species)[4Fe‐ 4S]1/8.lkD E=280[Bartsch 1978]

e385=14.8,e283=32.5△ e480=7.4[Bartsch 1978]

HiPIP(Rん ο dopsc αο οれα

s g̀Jα

ι

osα

)[4Fe‐ 4S]1/74AA[IHRFG]

E=330[Bartsch 1978]

E==330 [Rtteyer 1983]

e388=15.3,e283=35.4△ e480=9.1[Bartsch 1978]

HiPIP(Rん οα

opsθ

ごο

ttο

れα s gJobiゎ rmJS)[4Fe‐ 4S]1/mol E=450[Meyer 1983]

HiPIP(Rん οご

ospjttr

れ ι οん θ 2761)[4Fe‐

4S]1/′

63AA?[IHQFT?]

E=330[Bartsch 1978]

E==330 [ltteyer 1983]

e385=16.9,e282=26.7△ e480=8.4[Bartsch 1978]

HiPIP(Rん οα

ospjttr

脇 ι ο れθ 3761)[4Fe‑4S]1/63AA?[IHQFT?]

E=380[Meyer 1983]

HiPIP(7ん

jο

capsα

 praれ

れをだj)[4Fe‐ 4S]1/81AA[IHTF]

E=340[Bartsch 1978]

E==350 [Meyer 1983]

e375=15。 3,e283=45。 O  Δ  e480=8.5[Bartsch 1978]

Rubredox:n

Desulforedoxin(Des

J/Oυjbrjο

遷 誦実じ S)Fe2/′ 36AA[SDDVEG]

E=‐ 35,g=5。 73,7.72[Moura 1978a]

Rubredoxin I(Cん

Jοrοbj 脇 ιんjοs JraιoρんjJ

)Fe1/mol E=‑61[Meyer 1983]

Rubredoxin I((光

Jοrobjじ

屁 υ jbrjo/orれ a)Fe1/mol

peaks:575,492,370;pI=2.9[Steinmetz 1983]

Rubredo対 n II(Cん

JOrobj υ

jbrjo/ormθ

)

peaks:575,492,370;pI=2.7[Steinmetz 1983]

Rubredo対 n(α

osι

rjd m pα

θ

rjα

蔵 m)Fe1/54AA[RUCLEP,S2912o]

E=̲57[Lovenberg 1965]

Rubredoxin(Des

JJoυjbrjο arricα

s)Fel′

/6。

OkD

e490=11。 45,e378=13.38,e355dl=12.28,e278=25.53[Hatchikian 1979]

Rubredoxin(Des

J/Oυjbrjο

 das

Jraだπs Berre‐

Eau)Fe1/′ 52AA

g=4.3,9。 4[Fauque 1987]

e491=6.98,e378=8.40,e278=18.52[Fauque 1987]

Rubredoxin(Desじ

J/oυJbrjο ♂むα

S NCIB 9332)Fe1/″ 52AA[RUDVEG]

E≡

40(pH 7.6),g=4.27,9。 4[Moreno 1993]

Rubredo対 n(Das

J/Oυjbrjο

 

υJgα

ris Miyazaki)Fe1/52AA[JX0241]

E=5[Shimizu 1989]

(9)

Redox Properties of Electron Carrier Proteins of Low Redox Potentials      39

e489=8.1,e280=18.2[Ogata 1994]

Rubredoxin(Des J/aromο πα S  α

ι

α tts)Fe1/mol

e570轟

=2.6,e490=6.0,e370=7.1,e280=16.7[Probst 1978]

Rubredoxin(Psa ごοれοれα

S OJ00υ

ο

tts)Fe2/′ 172AA[RUPSEO]

g=4.0[PetersOn 1966]

2.2. Non‐

protein electron carriers

2.2.1. N:cotinanlide nuclootido

NADtt       E=‐ 320,e259=18,e339r=6.22,e259r=15[Sober 1968]

NADPtt      E=‐ 324,e259=18,e339r=6.22,e259r=15[Sober 1968]

2.2.2. Flavin and quinone

E is for quinOne/quinOl(n=2),El is for semiquinone″ /quinol(n=1),and E2 is for

quinone/′ semiquinone(n=1).

9′10‐

Antraqu:nono(AQ)

AQ‑1‑sulfOnate       E=‐ 218(pH 7,25° )[Clark 1960]

AQ‑2‑sulfonate       E=‐ 226(pH 7,25° )[Clark 1960]

E=‐ 234(pH 7,30。 )[Clark 1960]

E=‐ 225(pH 7.4,25° )[van Beeumen 1975]

E=‐ 255[Xavier 1979]

AQ‐

1,5¨

disulfonate         E=‐ 174(pH 7,25° )[Clark 1960]

E=‐ 170(pH 7.4,25° )[van Beeumen 1975]

AQ‐

1,8¨

disulfonate         E=‐ 206(pH 7,25° )EClark 1960]

AQ‐

2,6‐

disulfonate         E=‐ 184(pH 7,25° )[Clark 1960]

AQ‐

2,7¨

disulfonate         E=‐ 182(pH 7,25° )[Clark 1960]

Flavins

FAD      E=‐ 219[Sober 1968]

El=‐ 124,E2=‐ 314[Anderson 1983]

e450=11.3,e375=9.3,e260=37[Sober 1968]

FMN       E=‐ 218[Clark 1960]

E=‐ 211[Sober 1968]

E=‐ 219(pH 7.1)[Sober 1968]

El=‐ 124,E2=¨ 314[Anderson 1983]

e450=12.2,e375=10。 4,e260=27.1[Sober 1968]

lumifla宙 n acetate         E=‐ 223[Wang 1991]

riboflavin      E=‐ 208[SOber 1968]

El=‐ 124,E2=ぃ 314[Anderson 1983]

e450=12.2,e375=10。 6,e260=27.7[Sober 1968]

1′4‐

Naphthoqu:none(NQ)′ menaquinone(MK)′ and v:tamin K(VK)

NQ      E=74[Wallenfels 1943]

E=64[Schnorf 1966]

E=58[Millazzo 1971]

E=84[Wagner 1974]

2‐

hydroxyNQ      E=‐ 145(pH 7.4,25° )[van Beeumen 1975]

2,3‐

dimethylNQ       E=‐ 80[Schnorf 1966]

3‐

heptaprenylNQ;demethylMK  E=36[Schnorf 1966;Holttnder 1976]

VKl(2‐ methyl¨

3‐

phytylNQ)   E=‐ 43[calcd frOm data of Riegel 1940]

E=‐ 80[McCawley 1940]

E=¨74[Sehnorf 1966]

E=‐ 78[Wagner 1974]

VK2 MK‐ 5(2‐ methyl‐

3‐αJJ‐ιrαtts¨

pentaprenylNQ)

E=‐ 108[Wagner 1974]

(10)

40

Tatsuhiko Yagi

VK z MK-6 (2-methyl-}- all-trans-hexaprenylNQ)

E: -67 [Wagner L974)

VK, MK-e (2-methyt-3-att-tr@ns-nonapreti#il?]rf

1e661

E:-70 [Wagner L974]

VKs (menadione; 2-methylNQ) E:-1 [schnorf 1966]

2.2.3. Non-viologen artificial redox dye

dimethylphenosafranine E: -260 (pH 1.0-12, 30" ) [Clart 1gG0]

indigomonosulfonate E: -157 (pH 1.1-11, 30o ) [Clart 1gG0]

indigodisulfonate E:-125 (pH 1.1-11, 30o) [Clart 1960]

E:-116 (pH 0.4-9, 25o ) [Clart 1960]

indigotrisulfonate E:-81 (pH 1.1-11, 30o) [Clart< 1go0]

indigotetrasulfonate E: -46 (pH 1.1-11, 30o ) [Clart< 1go0]

l-methoxyPMS E:63 (pH ?.0), e505:2.U, e386:15.9 [Hisada L977]

neutral red E: -325 (pH 2.1-11, B0o ) [clart< 1960]

E:-329 (pH 0.5-t0, 25" ) [Chrn 1960]

phenazine ethosulfate E:55 [Wang 1991]

phenazine methosulfate (PMS) E:80 [Xavier LgTg]

phenosafranine E: -252 (pH 1.1-11, 30o ) [clart< 1gG0]

E:-225 (pH ?.4, 25") [van Beeumen 1975]

E=‑255[Xavier 1979]

E=¨ 245(pH 8。

0,25°

)[Watt 1979]

E=‐ 289[Wang 1991]

E=‐ 289(pH l.0‑12,30° )[Clark 1960]

E=‑289(pH 7。

4,25°

)[van Beeumen 1975]

tetraethylphenosafranine       E=‐ 254(pH 2.2‑9.8,30° )[Clark 1960]

tetramethylphenOsafranine    E="273(pH 3。

0‐8.2,30°

)[Clark 1960]

thiOindigodisulfonate      E=14(pH O.5‐

10.5,25°

)[Clark 1960]

thioindigotetrasulfonate         E=63(pH O‐

11.5,30°

)[Clark 1960]

toluidine blue       E=34(20° )[Clark 1960]

2.2.4.Viologen[abbre宙 ation;chemical name]

benzyl vi01ogen [BV; 1,1'‐

dibenzyl‐4,4'‐

dipyridinium dication]

E=‐ 359(pH indep,30° )[Michaelis 1933]

E=‐ 359(pH 8,30° )[Clark 1960]

E=‑354[Steckhan 1974]

E=‐ 311(pH 7.4,25° )[van Beeumen 1975]

E=‐ 345[Xavier 1979]

E=‐ 365(pH 8.0,25° )[Watt 1979]

E=‐ 360[Fraisse 1988]

E=‑350[Wang 1991]

e578r=12.0[Fraisse 1988]

e546r=9.75[Zoephel 1988]

betaine viologen [BtV; 1,1'‐ bis(carbOxymethyl)‐

4,4'‐

dipyridinium dicatiOn]

E=‐ 444(pH indep,30° )[Michaelis 1933]

E=̲444(pH ll,30° )[Clark 1960]

carbamoylmethyl vi010gen[CAV;1,1'¨ carbamoyl̲4,4'‐ dipyridiniuln dication]

E=‐ 296,e705r=2.2, e578r=14。4[Fraisse 1988]

6,7‐

dihydro‐

1,12‑dilnethyldipyrido[1,2‐ a:2,1‐

c]pyrazinium dibronlide E=‐ 580,e307=e310=15.6[Homer 1960a]

6,7‐

dihydro¨

2,11‐

dilnethyldipyridO[1,2‐

a:2,1‐

c]pyrazinium dibronlide E=‐ 349,e305=16.7[Homer 1960a]

E=‐ 490[Smith 1990]

safranine O

safranine T

(11)

Redox Properties of Electron Carrier Proteins of Low Redox Potentials 4l

6,

7- dihydro -3, 10- dimethyldipyrido [ 1,2- a:Z,L - cTpy r azinium dibromide

E: -479, 19.8(e320:e330(20.6 [Homer 1960a]

6,7-dihydrodipyridoh,2-a:2,1-cJpyrazinium dibromide

E:-548, e308:e311:19.0 [Homer 1960a]

dimethyldiquat IDMDQ; 4,4'-dim ethyl-2,2'-dipyridino-1,1'-ethylenedication]

E:-514, e436r:6.1 [Fraisse 1988]

dimethylpropyldiquat [DUfnq; 4,4'-dim ethyl-2,2'-dipyridino-1,1'-propenyl dication]

E: -656 [Fraisse 1988]

diquat [OQ; 1,1'-ethylene-2,2'-dipyridinium dication dibromide]

E:-350 [Homer 1960b; Zweig 1965]

ethyl viologen [EV; 1,1'-diethyl-4,4' -dipyridinium dication]

E: -M9 (pH indep, 30o ) h,tictraelis 19331

E: -M9 (pH 11, g0') [Clark 19G0]

E:-480 [schwarfz Lg6l)

methyl viologen [MV; 1,1'-dimethyl-4,4'-dipyridinium dication; paraquatJ

E: -MG (pH indep, 30o ) [Uicnaefis 1933]

E: -M0 (pH 8-13, 30o ) [Clart< 1960]

E: -470 lZweig 19651

E--444 (pH 7.a-11.0, 29") [Eisenstein 1969]

E: -460 [Stombaugh 19761

E:-M| (pH 11.0) [stombaugh 1976]

E:-4b0 (pH 8.0, 25") [Watt L979]

E: -M9 (pH 7.0) [pltiott 1982]

E: -444 [Fraisse 1988]

E: -MG [Smith 1990]

e396r: 42.6, e385r:2f1.4 lZweig 19651 e600r: tL.4, 425r:1.6 [Eisenstein 1969]

eb78r:g .6 lBadziong 19801

e730r: 2.4, e578r:9.0 [Fraisse 1988]

propyldiquat [eOq; 2,2' -dipyridino-1,1'-propenyl dication]

E: -550, e492r:3.0 [Fraisse 1988]

tetramethyl viologen [TMV; I,L',4,4'-tetramethyl-4,4'-dipyridinium dication]

E:-550, e?15r:1.2, e590r:9.7, e5?8r:8.7 [Fraisse 1988]

1,1',3-trimethyl-4,4'-dipyridinium dication

E: -61? [Xavier 1979]

triquat [TQ; 1,1'-trimethylene -2,2' -dipyridinium dication]

E: -550 [Homer 1960b]

E:-&18 [steckhan L974]

E:-550, e387r:L4.0 LZweig 1965J

3. Acknowledgements

The author is sincerely indebted to Mayumi Kuwahara who helped collecting papers,

and to Atsushi Yagi who rescued the collected data stored in a diskette which had been broken by an accident.

4. References

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FMN and FAD to their fully reduced forms. Biochim Biophys Acta 772, L58-I62

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Tatsuhiko Yagi

Armstrong FA, George SJ, Thomson AJ, Yates MG (1988) Direct electrochemistry in the characterization of redox proteins: Novel properties of Azotobacter 7Fe ferredoxin.

FEBS Lett 234, L07-Ll0

Armstrong FA, Bond AM, Hill HAO, Oliver BN, Psalti ISM (1991) Electrochemistry of cytochrome c, plastocyanin, and ferredoxin at edge- and basal-plane graphite electrodes interpreted via a model based on electron transfer at electroactive sites of microscopic dimentions in size. J Am Chem Soc 111, 9185-9189

Asso M, Mbarki O, Guigliarelli B, Yagi T, Bertrand P (1995) EPR and redox characte-

rization of ferredoxins I and II from Desulfouibrio uulgaris Miyazaki. Biochem Biophys Res Commun zLI, L98-204

Bachofen R, Arnon Dl (1966) Crystalline ferredoxin from the photosynthetic bacterium Chrornatium. Biochim Biophys Acta L20, 259-265

Badziong W, Thauer R K (1980) Vectorial electron transfer in Desulfouibrio uulgaris (Marburg) growing on hydrogen plus sulfate as sole energy source. Arch Microbiol L25, L67 -r74

Barman BG, Tollin G (L972) Flavin-protein interactions in flavoenzymes. Thermody- namics and kineties of reduction of Azotobacter flavodoxin. Biochemistry 11, 4755- 4759

Bartsch RG (1978) Purification of (afe-aS)'''' ferredoxins (high-potential iron-sulfur proteins) from bacteria. Methods Enzymol 53 329-U0 Chapter 35

Benning MM, Wesenberg G, Caffrey M S, Bartsch RG, Meyer TE, Cusanovich MA, Rayment l, Holden M (fggf) Uolecular structure of cytochrome cz isolated from Rhodobacter capsulatus determined at 2.5L resolution. J Mol Biol 220, 673-685

Benosman H, Asso M, Bertrand P, Yagi T, Gayda, J-P ( 1989) ppn study of the redox interactions in cytochrome cs from Desulfouibrio uulgaris Miyazaki. Eur J Bio-

chem 182, 51-55

Bertrand P, Bruschi M, Denis M, Gayda JP, Manca F (1982) Cytochrome cess from Desulfouibrio uulgaris: Potentiometric characterization by optical and EPR studies.

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Bianco P, Haladjian J (L977) Study of two forms of ferredoxin from Desulfouibrio grgas by differential pulse polarography. Biochem Biophys Res Commun 78, 323-327

Bianco P, Haladjian J (fggfa) Current-potential responses for a tetrahemic protein:

A method of determining the individual half-wave potentials of cytochrome cs from Desulfouibrio desulfuricans strain Norway. Electrochim Acta 26, 1001-1004

Bianco P, Haladjian J (1981b) Electrode reaction of cytochrome cssr.s (cz) from Desul- furornonas acetoxidans. Bioelectrochem Bioenerg 8, 239-245

Bianco P, Haladjian J, Pilard R, Bruschi M (1932) Electrochemistry of c-type

cytochromes. Electrode reactions of cytochrome csss from Desulfouibrio uulgaris Hildenborough. J Electroanal Chem L36, 29L-299

Bianco P, Haladjian J, Loutfi M, Bruschi M (1983) Comparative studies of monohemic bacterial c-type cytochromes. Redox and optical properties of. Desulfouibrio desulfuri- cans Norway cytochrom€

csss(s60>

and Pseudomonas aeruginoso cytochrome cur,. Biochem Biophys Res Commun 113, 526-530

Bianco P, Haladjian J, Tobiana G, Forget P, Bruschi M (19S4) Voltammetric determina-

tion of the redox potential of bacterial ferredoxins: Clostridium thermocellum ferredox-

in. Bioelectrochem Bioenerg 12, 509-516

Bruschi M, Loutfi M, Bianco P, Haladjian J (f984) Correlations studies between

structural and redox properties of cytochromes cs. Biochem Biophys Res Commun 120, 394-3gg

Bruschi M, Bertrand P, More C, Leroy G, Bonicel J, Haladjian J, Chottard G, Pollock WB R, Voordouw G ( 1992 ) Biochemical and spectroscopic characte fization of the

high molecular weight cytochrome c from Desulfouibrio uulgaris Hildenborough

expressed in Desulfouibrio desulfuricans G200. Biochemistry 31, 3281-3288

(13)

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